Free Cytoscape Training Sessions in February

Cytoscape is an open source network visualization tool.  Cytoscape allows the exploration of molecular interactions and biological pathways and integrates these networks with annotations, gene expression profiles and other data.

cytoscape

Interested in learning more about Cytoscape?  Attend one or both of the following hands-on workshops:

Cytoscape:  Going from Raw Data to a Publishable Image

During this workshop, we will utilize a raw experimental data set to visualize functional relationships of gene fusion partners in cancer as a case study to produce publication-quality images.  Participants will learn how to import network and attribute data, change visual properties to easily distinguish biologically significant relationships, create a legend for the image, and more.

This training will be held on Monday, February 4 from 9:00am-10:30am in 2802 Med Sci II.

You can get more information about this training and register here.

Cytoscape Training: Plug-Ins

Cytoscape can facilitate filtering, clustering and searching of your interactions. Many additional features are available through its extensive list of plug-ins. We will explore several of these plug-ins including: Michigan Molecular Interactions (a molecular interactions tool), Metscape (a metabolite exploration tool), MCODE (cluster finding tool), and BINGO (Gene Ontology tool).

This training will be held on Monday, February 11, 9:00am-11:00am in 2802 Med Sci II.

You can get more information about this training and register here.

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